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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs62585316 chr9:130731286 A/G PRAMEF16 chr1:13495254-13498260:+ 0.53 7.59 5.72E-10 Box Plot
ACC rs62585317 chr9:130739269 T/G PRAMEF16 chr1:13495254-13498260:+ 0.53 7.56 6.38E-10 Box Plot
ACC rs62585347 chr9:130743618 C/T PRAMEF16 chr1:13495254-13498260:+ 0.53 7.56 6.38E-10 Box Plot
ACC rs6431296 chr2:235674411 T/C GPR128 chr3:100328433-100414323:+ 0.9 7.62 5.04E-10 Box Plot
ACC rs6431322 chr2:234246038 C/G PRAMEF6 chr1:12998302-13007406:- 0.67 7.89 1.88E-10 Box Plot
ACC rs6453523 chr5:71554178 A/C GDPD5 chr11:75145685-75236948:- -0.77 -7.75 3.21E-10 Box Plot
ACC rs6468750 chr8:102021373 C/A PRHOXNB chr13:28552243-28562774:- 0.51 7.51 7.57E-10 Box Plot
ACC rs6468751 chr8:102021496 G/C PRHOXNB chr13:28552243-28562774:- 0.51 7.51 7.57E-10 Box Plot
ACC rs6477259 chr9:8099550 T/C GAS7 chr17:9813926-10101868:- -0.97 -7.79 2.74E-10 Box Plot
ACC rs6540625 chr1:210982274 G/C C18orf26 chr18:52254988-52266724:+ -0.75 -9.06 2.81E-12 Box Plot
ACC rs6650404 chr13:60790549 G/T PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs6691330 chr1:212350818 C/G PRHOXNB chr13:28552243-28562774:- 0.57 7.97 1.42E-10 Box Plot
ACC rs66966441 chr3:40333101 C/T PRHOXNB chr13:28552243-28562774:- 0.63 8.21 5.93E-11 Box Plot
ACC rs6703872 chr1:26798644 G/T TFDP3 chrX:132350697-132352376:- 0.89 8.38 3.22E-11 Box Plot
ACC rs6703980 chr1:212350975 A/G PRHOXNB chr13:28552243-28562774:- 0.57 7.97 1.42E-10 Box Plot